Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 43 (from 43) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Mexico Chichen Itza Maya (prehispanic) 1.063847
 2  A*02:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  Colombia North Wiwa El Encanto 0.961552
 3  A*68:01-B*40:02-C*03:04-DRB1*04:03  Russia Bering Island Aleuts 0.4808104
 4  B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  Mexico Mexico City Mestizo pop 2 0.4300234
 5  A*31:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02-DPB1*04:02  Panama 0.3800462
 6  A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  USA NMDP Alaska Native or Aleut 0.33471,376
 7  A*02:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02  Brazil Puyanawa 0.3333150
 8  A*68:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  USA NMDP Alaska Native or Aleut 0.27981,376
 9  A*68:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:02  USA San Diego 0.2600496
 10  A*26:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  Malaysia Peninsular Chinese 0.2577194
 11  A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 12  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01  Nicaragua Managua 0.2165339
 13  A*11:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  USA Asian pop 2 0.08901,772
 14  A*26:01-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.068018,604
 15  A*11:01-B*40:02-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.05407,595
 16  A*24:02-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.052018,604
 17  A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 18  A*29:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  USA Hispanic pop 2 0.04701,999
 19  A*24:02-B*40:02-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.03807,595
 20  A*31:01-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.031018,604
 21  A*11:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 22  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.03003,078
 23  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 24  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*02:01  Japan pop 17 0.03003,078
 25  A*26:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 26  A*26:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 27  A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 28  A*26:01-B*40:02-C*03:04-DRB1*04:03  Germany DKMS - Austria minority 0.02901,698
 29  A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*48:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02855,266
 30  A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02725,266
 31  A*11:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*14:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.02575,266
 32  A*02:03-B*40:02-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.01727,595
 33  A*26:01:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*48:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01635,266
 34  A*26:01-B*40:02-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.01497,595
 35  A*24:02:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*14:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.01255,266
 36  A*02:01-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.010018,604
 37  A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02  Germany DKMS - Turkey minority 0.01004,856
 38  A*24:02:01-B*40:02:01-C*03:04:01-DRB1*04:03:01-DPB1*05:01:01  Hong Kong Chinese HKBMDR HLA 11 loci 0.00895,266
 39  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:05  India West UCBB 0.00865,829
 40  A*24:02-B*40:02-C*03:04-DRB1*04:03-DQB1*03:05  India North UCBB 0.00855,849
 41  A*02:06-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.005018,604
 42  A*11:01-B*40:02-C*03:04-DRB1*04:03  Japan pop 16 0.005018,604
 43  A*01:01-B*40:02-C*03:04-DRB1*04:03  Hong Kong Chinese BMDR 0.00447,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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